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Nordic Gene Bank
Origin and diversity of North European sheep breeds
 
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DNA-markers    

Marker references: Sheep Genome Resources (NCBI)

Primer sequences         

Marker Origin OAA Size range Ann.temp. °C
BM0757 bovine 9 177-204 64-55
BM1314 bovine 22 140-178 59-50
BM1818 bovine 20 250-286 64-55
BM4621 bovine 6 127-175 64-55
BM6506 bovine 1 193-219 59-50
BM6526 bovine 26 144-188 64-55
BM8125 bovine 14 106-124 64-55
CSSM31 bovine 23 128-174 50-51
ILSTS002* bovine 14 120-142 56-56
INRA023 bovine 1 197-231 71-62
MAF214 ovine 16 134-262 67-58
MAF36 ovine 22 99-129 64-55
MAF48 ovine u.a. 118-142 67-58
MAF65 ovine 15 119-141 67-58
McM527 ovine 5 159-183 67-58
OarCP20 ovine 21 70-96 65-56
OarCP34 ovine 3 111-129 59-50
OarCP38 ovine 10 112-134 65-56
OarFCB11** ovine 2 121-143 67-58
OarFCB128 ovine 2 95-131 64-55
OarFCB304 ovine 19 146-198 64-55
OarFCB48 ovine 17 136-172 67-58
OarHH47 ovine 18 126-152 67-58
OarHH64* ovine 4 120-138 67-58
OarVH72 ovine 25 125-141 64-55

 *The loci OarHH64 and ILSTS002 demonstrate excess of homozygotes and are likely to contain non-amplifying alleles

**Low differentiation at locus OarFCB11 deviates from expectations based on neutrality

Note: One marker, ETH225, was excluded from the study due to non-amplifying alleles

Published Results
 
 
   


Created by ThEP and EE Edited by Emma Eythorsdottir for the North SheD group.
Agricultural Research Institute of Iceland.